| No | Nama Kecamatan | Pondok Pesantren |
|---|---|---|
| 1 | Pragaan | 3 |
| 2 | Bluto | 0 |
| 3 | Saronggi | 0 |
| 4 | Giligenteng | 3 |
| 5 | Talango | 0 |
| 6 | Kalianget | 0 |
| 7 | Kota Sumenep | 0 |
| 8 | Lenteng | 2 |
| 9 | Ganding | 2 |
| 10 | Guluk Guluk | 4 |
| 11 | Pasongsongan | 5 |
| 12 | Ambunten | 3 |
| 13 | Rubaru | 4 |
| 14 | Dasuk | 1 |
| 15 | Manding | 2 |
| 16 | Batuputih | 2 |
| 17 | Gapura | 0 |
| 18 | Batang-Batang | 0 |
| 19 | Dungkek | 0 |
| 20 | Nonggunong | 0 |
| 21 | Gayam | 0 |
| 22 | Ra as | 0 |
| 23 | Sapeken | 0 |
| 24 | Arjasa | 0 |
| 25 | Masalembu | 1 |
| 26 | Batuan | 0 |
| 27 | Kangayan | 0 |